Basic Information
Locus ID:
Sgl82814
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 34651334 | 34653021 | - | Sgl82814 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 29,741.84 Da | 38.86 | 86.85 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 47 | 3.1E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 68 | 3.79E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 59 | 1.8E-6 | - |
| SMART | SM00256 | fbox_2 | 11 | 50 | 9.0E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 5 | 59 | 9.338503 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61340.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_003610209.3 | F-box/kelch-repeat protein At3g23880 [Medicago truncatula] | 0 |
| Q9M2D0 | F-box protein At3g61340 OS=Arabidopsis thaliana OX=3702 GN=At3g61340 PE=2 SV=1 | 0 | |
| TrEMBL | A0A059B2S5 | F-box domain-containing protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_H02654 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14496 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl82814 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000044096 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30102390 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_03.1.V1.1, AsparagusV1_03.2.V1.1 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00028667, Pov_00041475 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-4812 |