HalophFGD

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Basic Information
Locus ID: Sgl82781
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrB9 34346132 34348311 - Sgl82781
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.49 23,897.79 Da 54.35 81.54 -0.43
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06222 RNase_H_like 78 198 4.61778E-19 IPR044730
Pfam PF13456 Reverse transcriptase-like 79 199 1.6E-19 IPR002156
SUPERFAMILY SSF53098 Ribonuclease H-like 73 198 1.9E-11 IPR012337
Gene3D G3DSA:3.30.420.10 - 74 201 1.1E-10 IPR036397
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0004523 (RNA-DNA hybrid ribonuclease activity)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_045798013.1 uncharacterized protein LOC123892252 [Trifolium pratense] 0
TrEMBL A0A392N306 Ribonuclease H protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda aralocaspica 1 GOSA_00028516
Amaranthaceae Suaeda glauca 12 Sgl10339, Sgl12213, Sgl12320, Sgl15576, Sgl17452, Sgl17603 ...
Sgl31150, Sgl36493, Sgl42248, Sgl47024, Sgl59481, Sgl82781
Arecaceae Phoenix dactylifera 1 gene-LOC103715302
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-11805
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.