Basic Information
Locus ID:
Sgl82541
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 31954582 | 31956459 | - | Sgl82541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 67,183.92 Da | 42.00 | 92.57 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 483 | 589 | 3.67996E-31 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 489 | 590 | 8.6E-17 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 441 | 588 | 1.93E-7 | IPR043502 |
| SUPERFAMILY | SSF56219 | DNase I-like | 32 | 230 | 1.31E-18 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 32 | 231 | 1.2E-20 | IPR036691 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20520.1 | RNA binding;RNA-directed DNA polymerases. | 0 |
| RefSeq | XP_048497307.1 | uncharacterized protein LOC104885230 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A2N9ISI7 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55207 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||