HalophFGD

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Basic Information
Locus ID: Sgl82425
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: source UniProtKB
Maps and Mapping Data
Chromosome Start End Strand ID
chrB9 30673037 30685347 - Sgl82425
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.97 76,012.44 Da 43.52 60.09 -0.90
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS50158 Zinc finger CCHC-type profile. 446 461 8.762648 IPR001878
MobiDBLite mobidb-lite consensus disorder prediction 380 415 - -
MobiDBLite mobidb-lite consensus disorder prediction 44 69 - -
MobiDBLite mobidb-lite consensus disorder prediction 590 658 - -
MobiDBLite mobidb-lite consensus disorder prediction 499 544 - -
MobiDBLite mobidb-lite consensus disorder prediction 254 275 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 69 - -
MobiDBLite mobidb-lite consensus disorder prediction 590 681 - -
MobiDBLite mobidb-lite consensus disorder prediction 489 544 - -
Gene Ontology
Molecular Function:
GO:0003676 (nucleic acid binding) GO:0008270 (zinc ion binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048493021.1 neurofilament medium polypeptide-like [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A803LYE9 ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 47 Sgl00531, Sgl03498, Sgl04359, Sgl04659, Sgl04769, Sgl04836 ...
Sgl04908, Sgl08608, Sgl09428, Sgl09699, Sgl09812, Sgl09861, Sgl09882, Sgl10000, Sgl21339, Sgl21360, Sgl21373, Sgl21374, Sgl22011, Sgl22085, Sgl26670, Sgl26690, Sgl26692, Sgl26693, Sgl27279, Sgl27362, Sgl35711, Sgl41028, Sgl43125, Sgl44253, Sgl44300, Sgl47951, Sgl49016, Sgl53025, Sgl53911, Sgl58300, Sgl58591, Sgl64452, Sgl64933, Sgl68311, Sgl68572, Sgl68900, Sgl69370, Sgl72162, Sgl75836, Sgl82402, Sgl82425
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.