HalophFGD

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Basic Information
Locus ID: Sgl82226
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
Chromosome Start End Strand ID
chrB9 27888884 27892557 - Sgl82226
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.06 44,529.85 Da 43.67 82.82 -0.52
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
ProSiteProfiles PS50966 Zinc finger SWIM-type profile. 240 276 8.86447 IPR007527
Gene Ontology
Molecular Function:
GO:0008270 (zinc ion binding)
KEGG Pathway
KO Term:
K17604 (zinc finger SWIM domain-containing protein 3)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048490450.1 protein FAR1-RELATED SEQUENCE 5-like [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A438G344 Protein FAR1-RELATED SEQUENCE OS=Vitis vinifera OX=29760 GN=FRS5_60 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda aralocaspica 4 GOSA_00014604, GOSA_00014605, GOSA_00014807, GOSA_00023619
Amaranthaceae Suaeda glauca 69 Sgl00340, Sgl00670, Sgl00740, Sgl00768, Sgl02587, Sgl03588 ...
Sgl04848, Sgl05396, Sgl05687, Sgl05773, Sgl06654, Sgl07743, Sgl08711, Sgl08712, Sgl09291, Sgl09891, Sgl10123, Sgl11267, Sgl12085, Sgl12211, Sgl12282, Sgl13848, Sgl13857, Sgl15315, Sgl15331, Sgl16659, Sgl17379, Sgl17449, Sgl17512, Sgl19021, Sgl20279, Sgl21137, Sgl24726, Sgl25611, Sgl26501, Sgl30781, Sgl32060, Sgl32061, Sgl34323, Sgl34325, Sgl34387, Sgl36019, Sgl37352, Sgl39724, Sgl39726, Sgl43147, Sgl43248, Sgl44007, Sgl46477, Sgl47605, Sgl48076, Sgl48776, Sgl50199, Sgl51202, Sgl55534, Sgl64142, Sgl68597, Sgl70548, Sgl73296, Sgl76815, Sgl78827, Sgl78928, Sgl79630, Sgl79779, Sgl79784, Sgl81389, Sgl82092, Sgl82226, Sgl82229
Plumbaginaceae Limonium bicolor 3 Lb0G37147, Lb3G20849, Lb6G29885
Tamaricaceae Reaumuria soongarica 2 MSTRG.16888_chr09_+, STRG.24247_chr10_+
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.