Basic Information
Locus ID:
Sgl81425
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin-conjugating enzyme E2, catalytic domain homologues
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 9650583 | 9653597 | + | Sgl81425 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 32,521.12 Da | 43.77 | 97.45 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 2 | 89 | 1.00301E-25 | IPR000608 |
| Pfam | PF00112 | Papain family cysteine protease | 174 | 228 | 3.1E-10 | IPR000668 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 2 | 89 | 9.0E-22 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 2 | 95 | 3.95E-26 | IPR016135 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 171 | 232 | 1.12E-13 | IPR038765 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 100 | 1.0E-25 | IPR016135 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 159 | 240 | 4.3E-11 | - |
| SMART | SM00212 | ubc_7 | 2 | 97 | 7.2E-4 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 1 | 97 | 26.607365 | IPR000608 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63800.2 | - | 0 |
| RefSeq | XP_042479380.1 | ubiquitin-conjugating enzyme E2 5-like isoform X1 [Macadamia integrifolia] | 0 |
| P42749 | Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana OX=3702 GN=UBC5 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J6W078 | Ubiquitin-conjugating enzyme, E2 (Fragment) OS=Thalictrum thalictroides OX=46969 GN=FRX31_019862 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||