Basic Information
Locus ID:
Sgl81404
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Zinc finger BED domain-containing protein RICESLEEPER
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB9 | 9361166 | 9362528 | - | Sgl81404 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 26,337.65 Da | 48.70 | 75.26 | -0.80 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021768212.1 | zinc finger BED domain-containing protein RICESLEEPER 2-like [Chenopodium quinoa] | 0 |
| Q0JMB2 | Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803KUW4 | DUF4413 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g013080 |
| Amaranthaceae | Salicornia bigelovii | 7 | Sbi_jg32175, Sbi_jg35571, Sbi_jg44497, Sbi_jg57117 ... |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg21848, Seu_jg22608, Seu_jg24262, Seu_jg8005 |
| Amaranthaceae | Suaeda aralocaspica | 116 | GOSA_00008971, GOSA_00009964, GOSA_00010539, GOSA_00010541 ... |
| Amaranthaceae | Suaeda glauca | 7 | Sgl04881, Sgl09926, Sgl22097, Sgl27371, Sgl75750, Sgl78946 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG15.1418 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g12240 |