Basic Information
Locus ID:
Sgl80483
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 36439002 | 36445182 | + | Sgl80483 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 62,905.73 Da | 42.80 | 109.31 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 13 | 50 | 4.2E-5 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 314 | 1.41E-15 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 59 | 1.31E-11 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 360 | 3.6E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 50 | 2.2E-6 | - |
| SMART | SM00256 | fbox_2 | 17 | 57 | 0.0081 | IPR001810 |
| Coils | Coil | Coil | 97 | 117 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55660.2 | FBD, F-box and Leucine Rich Repeat domains containing protein. | 0 |
| RefSeq | XP_021852597.1 | FBD-associated F-box protein At1g66310-like [Spinacia oleracea] | 0 |
| Q1PFK0 | F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RDZ1 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_082200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology