HalophFGD

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Basic Information
Locus ID: Sgl80028
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: F-box FBD LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrA9 31941798 31948376 + Sgl80028
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.56 50,402.56 Da 38.02 111.10 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 4 39 7.5E-5 IPR001810
SUPERFAMILY SSF52047 RNI-like 36 412 1.61E-9 -
SUPERFAMILY SSF81383 F-box domain 1 87 2.75E-8 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 99 409 6.3E-8 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019076929.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570 isoform X1 [Vitis vinifera] 0
TrEMBL A0A5J5ANW2 F-box domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_033068 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 7 gene_18365, gene_18366, gene_18368, gene_18369, gene_18371 ...
gene_18372, gene_3926
Amaranthaceae Suaeda glauca 3 Sgl80012, Sgl80028, Sgl82459
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.