Basic Information
Locus ID:
Sgl79716
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cell division control protein 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 27601967 | 27605585 | - | Sgl79716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 29,784.24 Da | 36.20 | 94.89 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01249 | Ribosomal protein S21e | 175 | 211 | 2.2E-19 | IPR001931 |
| Pfam | PF00069 | Protein kinase domain | 77 | 169 | 9.5E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 77 | 164 | 4.45E-22 | IPR011009 |
| Gene3D | G3DSA:3.30.1230.20 | - | 180 | 212 | 2.6E-19 | IPR038579 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 65 | 162 | 1.0E-11 | - |
| SMART | SM00220 | serkin_6 | 11 | 245 | 0.0039 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 206 | 9.262731 | IPR000719 |
| ProSitePatterns | PS00996 | Ribosomal protein S21e signature. | 185 | 193 | - | IPR018279 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38620.1 | cyclin-dependent kinase B1;2. Encodes a member of a plant specific family of cyclin dependent kinases. | 0 |
| RefSeq | XP_021865977.1 | cell division control protein 2 homolog C [Spinacia oleracea] | 0 |
| Q8L4P8 | Cyclin-dependent kinase B1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKB1-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QVR0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_136010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 12 | Sgl03515, Sgl08655, Sgl13622, Sgl14340, Sgl18805, Sgl19506 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120110907 |
| Brassicaceae | Brassica nigra | 2 | BniB02g081620.2N, BniB07g035400.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G022720 |
| Zosteraceae | Zostera marina | 1 | Zosma01g30210.v3.1 |