Basic Information
Locus ID:
Sgl79253
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin fusion degradation protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 16720131 | 16722142 | + | Sgl79253 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 34,074.80 Da | 44.76 | 85.39 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 36 | 207 | 9.4E-79 | IPR004854 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 246 | 302 | 1.12E-14 | IPR027410 |
| Gene3D | G3DSA:2.40.40.50 | - | 26 | 130 | 8.8E-43 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 132 | 205 | 1.8E-33 | - |
| Gene3D | G3DSA:3.30.260.10 | - | 246 | 299 | 8.1E-13 | IPR027410 |
| Gene3D | G3DSA:1.10.560.10 | - | 228 | 245 | 8.1E-13 | IPR027413 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.3 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_010690750.1 | ubiquitin fusion degradation protein 1 homolog isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7C9DBS3 | Ubiquitin fusion degradation protein 1 homolog (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology