Basic Information
Locus ID:
Sgl79043
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 11573655 | 11579630 | - | Sgl79043 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 26,768.44 Da | 42.40 | 91.09 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35880.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_010680394.2 | aspartyl protease family protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VYV9 | Aspartyl protease family protein 1 OS=Arabidopsis thaliana OX=3702 GN=APF1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RY12 | Peptidase A1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_015690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 18 | Sgl04409, Sgl04410, Sgl04816, Sgl09479, Sgl09480, Sgl21236 ... |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000027573 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6BG0024640 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0602718 |
| Poaceae | Zea mays | 2 | Zm00001eb026340_P001, Zm00001eb305040_P001 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-2454 |