Basic Information
Locus ID:
Sgl79019
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
synthase 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 11040043 | 11043278 | + | Sgl79019 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.67 | 12,503.96 Da | 33.73 | 120.64 | 0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78910.2 | - | 0 |
| RefSeq | XP_021892761.1 | RNA pseudouridine synthase 3, mitochondrial-like [Carica papaya] | 0 |
| Q5XET6 | RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g78910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2K3MNQ9 | RNA pseudourine synthase 3 mitochondrial-like (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g015558 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah029568 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl79019 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G11862, Lb4G23471 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g32560.1 |