Basic Information
Locus ID:
Sgl78361
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA9 | 2862558 | 2868288 | - | Sgl78361 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 89,711.04 Da | 38.87 | 79.84 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 95 | 290 | 9.52867E-98 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 108 | 268 | 2.9E-11 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 273 | 754 | 2.1E-184 | IPR001404 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 627 | 747 | 3.92E-31 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 346 | 604 | 3.72E-88 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 85 | 300 | 1.7E-61 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 604 | 751 | 2.8E-45 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 344 | 516 | 1.1E-68 | - |
| Gene3D | G3DSA:3.40.50.11260 | - | 517 | 603 | 3.2E-32 | - |
| Gene3D | G3DSA:3.30.565.10 | - | 72 | 314 | 1.5E-86 | IPR036890 |
| SMART | SM00387 | HKATPase_4 | 108 | 270 | 0.0027 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 45 | 782 | 1.9E-236 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 106 | 115 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 174 | 191 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 203 | 225 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 258 | 275 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 106 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 276 | 294 | 3.0E-64 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 156 | 173 | 3.0E-64 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 83 | 748 | 25.488758 | IPR001404 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07770.1 | HEAT SHOCK PROTEIN 89.1. | 0 |
| RefSeq | XP_010665948.1 | heat shock protein 90-6, mitochondrial [Beta vulgaris subsp. vulgaris] | 0 |
| F4JFN3 | Heat shock protein 90-6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HSP90-6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0J8B8Z8 | HATPase_c domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_9g225070 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology