Basic Information
Locus ID:
Sgl77852
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 40323204 | 40329047 | - | Sgl77852 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 36,810.07 Da | 45.36 | 94.06 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01763 | Ubl_SUMO_like | 259 | 311 | 1.02852E-7 | - |
| Pfam | PF08423 | Rad51 | 9 | 158 | 4.1E-18 | IPR013632 |
| Pfam | PF00240 | Ubiquitin family | 258 | 316 | 2.5E-6 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 258 | 317 | 2.76E-9 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 182 | 225 | 4.34E-5 | IPR029071 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 9 | 165 | 7.77E-13 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 193 | 4.8E-25 | IPR027417 |
| Gene3D | G3DSA:3.10.20.90 | - | 244 | 316 | 7.8E-6 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 259 | 316 | 9.743701 | IPR000626 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 1 | 102 | 14.987045 | IPR020588 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57450.1 | homolog of X-ray repair cross complementing 3 (XRCC3). Involved in homologous recombination and recombinational repair, mutants are sterile, hypersensitive to DNA crosslinking agents, show aberrant meiosis with extensive chromosome fragmentation | 0 |
| RefSeq | XP_047078076.1 | DNA repair protein XRCC3 homolog [Lolium rigidum] | 0 |
| Q9FKM5 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana OX=3702 GN=XRCC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5VSP9 | RECA_2 domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0002g24355 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||