Basic Information
Locus ID:
Sgl77431
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
neutrophil clearance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 36330692 | 36333935 | - | Sgl77431 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 102,730.03 Da | 37.75 | 88.22 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 591 | 866 | 1.15367E-92 | - |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 97 | 135 | 1.4E-6 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 588 | 861 | 2.5E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 330 | 368 | 2.4E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 70 | 2.9E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 573 | 874 | 9.34E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 453 | 8.25E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 331 | 456 | 4.5E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 37 | 326 | 7.8E-72 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 663 | 880 | 4.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 546 | 662 | 1.5E-34 | - |
| SMART | SM00369 | LRR_typ_2 | 143 | 168 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 394 | 418 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 118 | 96.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 585 | 867 | 5.8E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 119 | 142 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 192 | 215 | 0.38 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 585 | 867 | 39.495354 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 98 | 120 | 7.688853 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 591 | 613 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 914 | 940 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010685103.2 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology