Basic Information
Locus ID:
Sgl77418
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
eukaryotic translation initiation factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 36258342 | 36268805 | + | Sgl77418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.49 | 203,882.41 Da | 43.18 | 74.06 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01887 | IF2_eIF5B | 99 | 309 | 2.90308E-87 | - |
| Pfam | PF00009 | Elongation factor Tu GTP binding domain | 100 | 306 | 5.1E-32 | IPR000795 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1298 | 1392 | 4.77E-5 | IPR016181 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 96 | 317 | 4.86E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 89 | 318 | 4.8E-70 | IPR027417 |
| SMART | SM00384 | AT_hook_2 | 573 | 585 | 0.32 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 822 | 834 | 71.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 487 | 499 | 8.7 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 448 | 460 | 210.0 | IPR017956 |
| SMART | SM00384 | AT_hook_2 | 649 | 661 | 13.0 | IPR017956 |
| TIGRFAM | TIGR00231 | small_GTP: small GTP-binding protein domain | 101 | 227 | 1.4E-15 | IPR005225 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1276 | 1411 | 9.873011 | IPR000182 |
| ProSiteProfiles | PS51722 | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 96 | 312 | 44.025528 | IPR000795 |
| PRINTS | PR00929 | AT-hook-like domain signature | 647 | 657 | 5.7E-6 | IPR017956 |
| PRINTS | PR00929 | AT-hook-like domain signature | 571 | 582 | 5.7E-6 | IPR017956 |
| PRINTS | PR00929 | AT-hook-like domain signature | 487 | 497 | 5.7E-6 | IPR017956 |
| PRINTS | PR00315 | GTP-binding elongation factor signature | 164 | 174 | 2.0E-6 | IPR000795 |
| PRINTS | PR00315 | GTP-binding elongation factor signature | 216 | 225 | 2.0E-6 | IPR000795 |
| PRINTS | PR00315 | GTP-binding elongation factor signature | 100 | 113 | 2.0E-6 | IPR000795 |
| PRINTS | PR00315 | GTP-binding elongation factor signature | 180 | 191 | 2.0E-6 | IPR000795 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1008 | 1047 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1008 | 1034 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 750 | 766 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1574 | 1595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 808 | 832 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 456 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 697 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 749 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1622 | 1642 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 503 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G76810.1 | eukaryotic translation initiation factor 2 (eIF-2) family protein. | 0 |
| RefSeq | XP_010679053.2 | uncharacterized protein LOC104894503 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| G0S8G9 | Eukaryotic translation initiation factor 5B OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=CTHT_0029840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RSQ4 | PHD-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_032500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology