Basic Information
Locus ID:
Sgl76613
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 30712733 | 30713236 | - | Sgl76613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.78 | 19,299.77 Da | 45.86 | 77.01 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 10 | 96 | 1.5E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 94 | 6.03E-14 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 126 | 5.5E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 100 | 8.513628 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 152 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46290.1 | hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. | 0 |
| RefSeq | XP_017253432.1 | PREDICTED: receptor-like protein kinase HERK 1 [Daucus carota subsp. sativus] | 0 |
| Q9LX66 | Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana OX=3702 GN=HERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2ZHK9 | Putative receptor-like protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110893pilonHSYRG01125 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 12 | jg26190, jg27419, jg33699, jg39948, jg40172, jg40174 ... |
| Amaranthaceae | Atriplex hortensis | 1 | Ah029071 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54771, Sgl60073, Sgl72325, Sgl76613 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000051255 |
| Apiaceae | Apium graveolens | 1 | Ag9G02308 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_05.568.V1.1 |
| Brassicaceae | Brassica nigra | 1 | BniB05g034230.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0418 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-10546 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023685 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_052093, gene-QYE76_060103 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G131900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG082610 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.30721.1, evm.TU.35434.1, evm.TU.40350.1 ... |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-2331, nbisL1-mrna-2391 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.454 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17773, nbisL1-mrna-21411 |
| Salicaceae | Populus euphratica | 2 | populus_peu25128, populus_peu25129 |
| Zosteraceae | Zostera marina | 1 | Zosma06g07960.v3.1 |