Basic Information
Locus ID:
Sgl75919
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 21663251 | 21665969 | + | Sgl75919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 77,605.81 Da | 45.52 | 84.71 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 202 | 240 | 9.77808E-5 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 419 | 665 | 3.8E-37 | IPR000719 |
| Pfam | PF01476 | LysM domain | 204 | 247 | 7.9E-5 | IPR018392 |
| Pfam | PF04478 | Mid2 like cell wall stress sensor | 280 | 317 | 1.6E-5 | IPR007567 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 665 | 1.8E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 454 | 688 | 1.2E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 360 | 452 | 3.9E-14 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 202 | 256 | 9.7E-7 | IPR036779 |
| SMART | SM00257 | LysM_2 | 203 | 247 | 0.0013 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 202 | 246 | 10.912178 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 669 | 30.802946 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 279 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021746439.1 | protein LYK5-like [Chenopodium quinoa] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803NB60 | Protein LYK5-like OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology