Basic Information
Locus ID:
Sgl75836
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
DNA RNA polymerases superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 19668399 | 19681419 | + | Sgl75836 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 92,574.78 Da | 54.85 | 76.84 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00303 | retropepsin_like | 626 | 715 | 2.14726E-18 | - |
| CDD | cd00303 | retropepsin_like | 391 | 478 | 5.71537E-19 | - |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 373 | 500 | 2.1E-8 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 604 | 741 | 2.6E-10 | IPR021109 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 572 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 755 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021767609.1 | uncharacterized protein LOC110731999 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A151SSI8 | CCHC-type domain-containing protein OS=Cajanus cajan OX=3821 GN=KK1_003982 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||