Basic Information
Locus ID:
Sgl75772
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
ECA2
Description:
Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 18561452 | 18569761 | - | Sgl75772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 68,807.58 Da | 44.79 | 96.13 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00702 | haloacid dehalogenase-like hydrolase | 169 | 292 | 1.7E-14 | - |
| Pfam | PF10191 | Golgi complex component 7 (COG7) | 566 | 615 | 1.5E-9 | IPR019335 |
| Pfam | PF10191 | Golgi complex component 7 (COG7) | 416 | 551 | 7.9E-26 | IPR019335 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 49 | 7.42E-11 | IPR011009 |
| SUPERFAMILY | SSF56784 | HAD-like | 163 | 303 | 6.95E-31 | IPR036412 |
| SUPERFAMILY | SSF81660 | Metal cation-transporting ATPase, ATP-binding domain N | 79 | 182 | 6.1E-21 | IPR023299 |
| Gene3D | G3DSA:3.40.50.1000 | - | 178 | 303 | 1.7E-75 | IPR023214 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 36 | 3.6E-8 | - |
| Gene3D | G3DSA:3.40.1110.10 | - | 77 | 177 | 1.7E-75 | IPR023299 |
| TIGRFAM | TIGR01494 | ATPase_P-type: HAD ATPase, P-type, family IC | 252 | 298 | 2.0E-18 | IPR001757 |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 192 | 202 | 5.9E-18 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 278 | 297 | 5.9E-18 | - |
| PRINTS | PR00119 | P-type cation-transporting ATPase superfamily signature | 170 | 181 | 5.9E-18 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00900.1 | ER-type Ca2+-ATPase 2. Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm. | 0 |
| RefSeq | XP_010693884.1 | calcium-transporting ATPase, endoplasmic reticulum-type [Beta vulgaris subsp. vulgaris] | 0 |
| Q42883 | Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum OX=4081 GN=LCA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KZR9 | Cation_ATPase_N domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg14110 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_24328 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah035377 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21490, Sbi_jg22325 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16256 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00008841 |
| Amaranthaceae | Suaeda glauca | 27 | Sgl00141, Sgl00549, Sgl05200, Sgl05553, Sgl12990, Sgl14644 ... |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000017348, gene:ENSEOMG00000018217 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0020330, CQ.Regalona.r1.2AG0022080 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30180960 |
| Apiaceae | Apium graveolens | 1 | Ag10G02678 |
| Arecaceae | Cocos nucifera | 2 | COCNU_08G007560, COCNU_08G007570 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103712245 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1414.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G05449 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G51430.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10012691m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp6g13590.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB02g028680.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0180 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0121 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno15g02200 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0037s00015.v1.0, Dusal.0037s00016.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g03520 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11447 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2332 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00040788 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb5G29165 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.2623, BH06.2427, CH06.2712 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0547750, gene-QOZ80_6BG0501400 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0736930.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_036170 |
| Poaceae | Oryza coarctata | 1 | Oco12G015110 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g45830.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G223100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103212, Pt_Chr0401296 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr02G031620, Chr05G009480, Chr10G019990, Chr11G002670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G797200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG065710, gene_TRIDC7BG059350 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G470900.1, TraesCS7B02G372700.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb389950_P005 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g30972, Zma_g33232 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.1186 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc07g04150 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.1271 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-12460, nbisL1-mrna-12569 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-18598 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12839 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000010l.302 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00008928 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-560 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8902 |
| Salicaceae | Populus euphratica | 1 | populus_peu34209 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132618895 |
| Solanaceae | Solanum chilense | 1 | SOLCI003172600 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107020335 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5377 |
| Tamaricaceae | Tamarix chinensis | 1 | TC05G0206 |
| Zosteraceae | Zostera marina | 1 | Zosma06g03710.v3.1 |