halophFGD

Basic Information

Locus ID: Sgl75751

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Retroviral aspartyl protease

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB8	17981270	17983002	+	Sgl75751

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.22	41,185.22 Da	60.13	76.45	-0.53

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03732	Retrotransposon gag protein	161	254	9.7E-14	IPR005162
SUPERFAMILY	SSF56672	DNA/RNA polymerases	285	361	1.89E-14	IPR043502
Gene3D	G3DSA:3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	298	361	6.2E-14	-
MobiDBLite	mobidb-lite	consensus disorder prediction	57	79	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	95	109	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	57	109	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_021729843.1	uncharacterized protein LOC110696816 [Chenopodium quinoa]	0
TrEMBL	A0A0K9R9P1	Retrotrans_gag domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_091050 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	144	Sgl00054, Sgl00059, Sgl00122, Sgl00123, Sgl00785, Sgl03218 ... Sgl03679, Sgl03687, Sgl03723, Sgl03991, Sgl03993, Sgl04037, Sgl04361, Sgl04545, Sgl04569, Sgl04770, Sgl04822, Sgl04824, Sgl04939, Sgl05054, Sgl05127, Sgl05190, Sgl05796, Sgl08539, Sgl08580, Sgl08790, Sgl08798, Sgl08830, Sgl09430, Sgl09591, Sgl09616, Sgl09814, Sgl09873, Sgl10006, Sgl10108, Sgl13177, Sgl13755, Sgl14041, Sgl14184, Sgl18330, Sgl18480, Sgl19162, Sgl19200, Sgl19418, Sgl19458, Sgl19545, Sgl20479, Sgl20541, Sgl20748, Sgl21403, Sgl21838, Sgl22031, Sgl25859, Sgl25920, Sgl26130, Sgl26728, Sgl27312, Sgl30940, Sgl31162, Sgl32072, Sgl32092, Sgl32156, Sgl32313, Sgl32394, Sgl32643, Sgl32876, Sgl32884, Sgl36504, Sgl36546, Sgl37358, Sgl37387, Sgl37610, Sgl37693, Sgl37935, Sgl38147, Sgl43535, Sgl44020, Sgl44110, Sgl44120, Sgl44521, Sgl44576, Sgl44829, Sgl45070, Sgl46105, Sgl47766, Sgl48331, Sgl48789, Sgl48877, Sgl49024, Sgl49287, Sgl49294, Sgl49339, Sgl49591, Sgl49839, Sgl50799, Sgl52998, Sgl53097, Sgl53337, Sgl53592, Sgl53793, Sgl53890, Sgl58273, Sgl58399, Sgl58853, Sgl58868, Sgl59058, Sgl59221, Sgl64584, Sgl65072, Sgl65136, Sgl65556, Sgl69033, Sgl69559, Sgl69651, Sgl69879, Sgl71961, Sgl71964, Sgl72009, Sgl72023, Sgl72113, Sgl72177, Sgl72187, Sgl72319, Sgl74411, Sgl75527, Sgl75571, Sgl75720, Sgl75740, Sgl75751, Sgl77963, Sgl78783, Sgl78923, Sgl79041, Sgl79422, Sgl79476, Sgl79562, Sgl79692, Sgl79825, Sgl81252, Sgl81496, Sgl81889, Sgl81952, Sgl82030, Sgl82151