Basic Information
Locus ID:
Sgl75715
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
High mobility group B protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 17120862 | 17121874 | + | Sgl75715 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 9,445.94 Da | 42.43 | 92.94 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain | 24 | 70 | 6.8E-11 | IPR001606 |
| SUPERFAMILY | SSF46774 | ARID-like | 17 | 71 | 5.97E-15 | IPR036431 |
| Gene3D | G3DSA:1.10.150.60 | - | 7 | 75 | 3.5E-13 | IPR036431 |
| ProSiteProfiles | PS51011 | ARID domain profile. | 20 | 85 | 12.88694 | IPR001606 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04880.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_021749149.1 | high mobility group B protein 15-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9MAT6 | High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A396GSH4 | Putative transcription factor & chromatin remodeling ARID family OS=Medicago truncatula OX=3880 GN=MtrunA17_Chr7g0214491 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology