Basic Information
Locus ID:
Sgl75600
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 14991212 | 14991583 | - | Sgl75600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 14,124.50 Da | 24.55 | 94.15 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56219 | DNase I-like | 5 | 115 | 2.02E-7 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 4 | 123 | 4.3E-11 | IPR036691 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_010685067.1 | uncharacterized protein LOC104899550 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803PR18 | Reverse transcriptase domain-containing protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 13 | Sgl03985, Sgl04062, Sgl09052, Sgl09126, Sgl64894, Sgl65522 ... |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_07.2727.V1.1 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-37072 |