Basic Information
Locus ID:
Sgl75125
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
DNA recombination
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 5645394 | 5653992 | - | Sgl75125 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 58,796.68 Da | 34.03 | 95.01 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04481 | RPA1_DBD_B_like | 103 | 203 | 5.02375E-22 | - |
| CDD | cd04480 | RPA1_DBD_A_like | 13 | 75 | 6.49685E-16 | - |
| Pfam | PF16900 | Replication protein A OB domain | 96 | 181 | 4.1E-7 | IPR031657 |
| Pfam | PF02721 | Domain of unknown function DUF223 | 35 | 75 | 1.7E-5 | IPR003871 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 84 | 206 | 6.28E-20 | IPR012340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 300 | 384 | 4.51E-8 | IPR015300 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 13 | 79 | 4.71E-6 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 80 | 214 | 1.7E-27 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 8 | 79 | 5.5E-10 | - |
| Gene3D | G3DSA:2.40.330.10 | - | 284 | 386 | 1.7E-8 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52950.1 | Nucleic acid-binding, OB-fold-like protein. | 0 |
| RefSeq | XP_021840079.1 | replication protein A 70 kDa DNA-binding subunit-like [Spinacia oleracea] | 0 |
| TrEMBL | A0A6I9RGP9 | uncharacterized protein LOC105048395 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105048395 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||