Basic Information
Locus ID:
Sgl75114
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Tudor PWWP MBT superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB8 | 5494776 | 5500087 | - | Sgl75114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 102,174.32 Da | 42.45 | 68.64 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 288 | 374 | 6.56416E-22 | - |
| Pfam | PF00855 | PWWP domain | 291 | 372 | 1.5E-14 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 288 | 391 | 1.99E-22 | - |
| SUPERFAMILY | SSF54928 | RNA-binding domain, RBD | 812 | 901 | 1.68E-6 | IPR035979 |
| Gene3D | G3DSA:2.30.30.140 | - | 277 | 381 | 4.2E-20 | - |
| SMART | SM00293 | PWWP_4 | 288 | 349 | 4.0E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 290 | 351 | 12.610832 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 555 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 927 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 526 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 800 | 814 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 788 | 817 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 902 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 543 | 594 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 62 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_021865134.1 | uncharacterized protein LOC110803906 [Spinacia oleracea] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RXW3 | PWWP domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_016280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology