HalophFGD

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Basic Information
Locus ID: Sgl74566
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: DA1-related
Maps and Mapping Data
Chromosome Start End Strand ID
chrB8 953193 957949 - Sgl74566
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.02 31,531.53 Da 60.25 73.85 -0.24
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12315 Protein DA1 219 252 1.2E-7 IPR022087
Pfam PF17834 Beta-sandwich domain in beta galactosidase 48 103 1.8E-23 IPR041392
Best hit
Source Best Hit ID Description E-value
TAIR AT2G39830.4 - 0
RefSeq XP_048495534.1 protein DA1-related 2 isoform X3 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot Q0WSN2 Protein DA1-related 2 OS=Arabidopsis thaliana OX=3702 GN=DAR2 PE=1 SV=1 0
TrEMBL A0A218WC39 DA1-like domain-containing protein OS=Punica granatum OX=22663 GN=CDL15_Pgr025867 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 2 Sbi_jg36150, Sbi_jg854
Amaranthaceae Salicornia europaea 3 Seu_jg14697, Seu_jg22036, Seu_jg3800
Amaranthaceae Suaeda glauca 2 Sgl74566, Sgl83234
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.