HalophFGD

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Basic Information
Locus ID: Sgl74520
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Uncharacterised conserved protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrB8 604085 611469 + Sgl74520
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.58 78,926.06 Da 42.95 96.57 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 98 124 3.5E-4 IPR001810
Pfam PF09758 Uncharacterised conserved protein 264 310 3.0E-6 IPR019155
SUPERFAMILY SSF81383 F-box domain 12 50 6.54E-7 IPR036047
Gene3D G3DSA:1.20.1280.50 - 2 53 4.9E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K19513 (protein CLEC16A)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048504521.1 protein TRANSPARENT TESTA 9 isoform X6 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0K9RBR1 FPL domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084720 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 2 Sgl70949, Sgl74520
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.