Basic Information
Locus ID:
Sgl74388
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
acid phosphatase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 42680491 | 42685131 | + | Sgl74388 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 168,024.81 Da | 44.28 | 86.45 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 1199 | 1446 | 8.26831E-59 | - |
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 95 | 234 | 8.6E-27 | IPR025558 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1205 | 1435 | 5.5E-48 | IPR000477 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1157 | 1434 | 1.56E-21 | IPR043502 |
| SUPERFAMILY | SSF56219 | DNase I-like | 716 | 946 | 4.71E-28 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 713 | 947 | 8.2E-31 | IPR036691 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 1186 | 1455 | 16.111765 | IPR000477 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 47 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20520.1 | RNA binding;RNA-directed DNA polymerases. | 0 |
| RefSeq | XP_048497307.1 | uncharacterized protein LOC104885230 [Beta vulgaris subsp. vulgaris] | 0 |
| O00370 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FQ21 | CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS16736 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||