HalophFGD

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Basic Information
Locus ID: Sgl74288
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chrA8 41592268 41599753 - Sgl74288
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.57 98,902.81 Da 44.46 71.70 -0.61
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF54001 Cysteine proteinases 646 843 1.1E-8 IPR038765
Gene3D G3DSA:3.40.395.10 Adenoviral Proteinase; Chain A 661 862 7.8E-12 -
MobiDBLite mobidb-lite consensus disorder prediction 427 444 - -
MobiDBLite mobidb-lite consensus disorder prediction 99 113 - -
MobiDBLite mobidb-lite consensus disorder prediction 406 426 - -
MobiDBLite mobidb-lite consensus disorder prediction 370 469 - -
MobiDBLite mobidb-lite consensus disorder prediction 527 593 - -
MobiDBLite mobidb-lite consensus disorder prediction 95 117 - -
MobiDBLite mobidb-lite consensus disorder prediction 554 579 - -
Coils Coil Coil 857 877 - -
Coils Coil Coil 490 517 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048504174.1 uncharacterized protein LOC104885408 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A803MHU3 ULP_PROTEASE domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 17 Sgl00240, Sgl00461, Sgl31428, Sgl36741, Sgl50062, Sgl53477 ...
Sgl65282, Sgl65285, Sgl65310, Sgl65311, Sgl69676, Sgl69679, Sgl69700, Sgl69701, Sgl74288, Sgl74311, Sgl77853
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.