Basic Information
Locus ID:
Sgl74206
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Replication factor A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 40529935 | 40532205 | - | Sgl74206 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 38,827.53 Da | 40.74 | 84.69 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 102 | 230 | 2.01E-13 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 94 | 234 | 6.5E-22 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 327 | - | - |
KEGG Pathway
KO Term:
Pathway:
ko03030 (DNA replication)
map03030 (DNA replication)
ko03420 (Nucleotide excision repair)
map03420 (Nucleotide excision repair)
ko03430 (Mismatch repair)
map03430 (Mismatch repair)
ko03440 (Homologous recombination)
map03440 (Homologous recombination)
ko03460 (Fanconi anemia pathway)
map03460 (Fanconi anemia pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021859321.1 | replication protein A 70 kDa DNA-binding subunit B-like [Spinacia oleracea] | 0 |
| TrEMBL | A0A8J4QF91 | Rep_fac-A_C domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_024594 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology