Basic Information
Locus ID:
Sgl73989
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
SERK1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 38414961 | 38423629 | + | Sgl73989 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 68,475.34 Da | 40.31 | 95.44 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14664 | STK_BAK1_like | 303 | 574 | 2.17021E-164 | - |
| Pfam | PF00069 | Protein kinase domain | 298 | 569 | 1.3E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 61 | 2.0E-9 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 161 | 178 | 1.4 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 186 | 3.57E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 572 | 3.28E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 374 | 591 | 1.8E-70 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 266 | 373 | 8.8E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 207 | 1.4E-62 | IPR032675 |
| SMART | SM00220 | serkin_6 | 297 | 571 | 6.2E-35 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 161 | 182 | 7.018892 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 297 | 584 | 36.795761 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 303 | 325 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71830.1 | somatic embryogenesis receptor-like kinase 1. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later | 0 |
| RefSeq | NP_001313696.2 | somatic embryogenesis receptor kinase 1 precursor [Gossypium hirsutum] | 0 |
| Q94AG2 | Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=SERK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5D2UL74 | Protein kinase domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D06G132200v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology