Basic Information
Locus ID:
Sgl73842
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
LON peptidase N-terminal domain and RING finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 37429907 | 37432376 | + | Sgl73842 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.82 | 40,616.15 Da | 64.61 | 65.82 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 318 | 355 | 2.06241E-10 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 316 | 359 | 3.5E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 317 | 362 | 1.04E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 290 | 366 | 9.4E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 318 | 355 | 2.1E-4 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 318 | 356 | 10.984472 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 290 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 253 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 231 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 261 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 175 | - | - |
| Coils | Coil | Coil | 290 | 310 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07120.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_021720045.1 | uncharacterized protein LOC110687733 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9R914 | RING-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_092810 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology