Basic Information
Locus ID:
Sgl73820
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
NRT2.3
Description:
High affinity nitrate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 37226400 | 37232904 | - | Sgl73820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 76,168.17 Da | 34.70 | 87.21 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17341 | MFS_NRT2_like | 40 | 381 | 3.8618E-105 | IPR044772 |
| Pfam | PF03770 | Inositol polyphosphate kinase | 489 | 667 | 3.2E-49 | IPR005522 |
| Pfam | PF07690 | Major Facilitator Superfamily | 44 | 373 | 1.9E-16 | IPR011701 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 410 | 670 | 3.04E-54 | - |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 28 | 383 | 8.5E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 32 | 230 | 5.5E-19 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 245 | 390 | 4.7E-16 | IPR036259 |
| Gene3D | G3DSA:3.30.470.160 | Inositol polyphosphate kinase | 445 | 675 | 7.2E-65 | IPR038286 |
Gene Ontology
Biological Process:
KEGG Pathway
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12940.1 | nitrate transporter2.5. member of High affinity nitrate transporter family | 0 |
| RefSeq | XP_021845686.1 | high affinity nitrate transporter 2.5-like [Spinacia oleracea] | 0 |
| Q9LPV5 | High affinity nitrate transporter 2.5 OS=Arabidopsis thaliana OX=3702 GN=NRT2.5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RP88 | MFS domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_044520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg18345, jg18347 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25109 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah028212, Ah031800 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_2g044190, BVRB_2g044200, BVRB_7g167010 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19284, Sbi_jg43846 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg18070 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00003465, GOSA_00003467, GOSA_00003468, GOSA_00014560 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl65668, Sgl69984, Sgl73780, Sgl73820, Sgl77285 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000008305, gene:ENSEOMG00000016060 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2AG0001150, CQ.Regalona.r1.2BG0002220 ... |
| Apiaceae | Apium graveolens | 2 | Ag4G00048, Ag9G01216 |
| Arecaceae | Cocos nucifera | 3 | COCNU_02G016080, COCNU_02G016090, COCNU_15G006210 |
| Arecaceae | Phoenix dactylifera | 4 | gene-LOC103712359, gene-LOC103720079, gene-LOC120111460 ... |
| Asteraceae | Flaveria trinervia | 2 | Ftri1G26471, Ftri9G19397 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT5G07370.2, AT5G61760.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10004707m.g.v1.0, Thhalv10013933m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp2g24960.v2.2, Sp6g35500.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB02g053520.2N, BniB02g068040.2N, BniB02g075550.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1984 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G2170 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno03g13700 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0011s00020.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g12060 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-11461 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.527 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00020050, Pov_00026879 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G00034, Lb5G29326 |
| Poaceae | Echinochloa crus-galli | 1 | BH07.1950 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0132440, gene-QOZ80_2BG0187850 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0728860.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_022638 |
| Poaceae | Oryza coarctata | 2 | Oco03G011300, Oco04G011690 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g32370.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G147800 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0505422, Pt_Chr0505445 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr06G010860, Chr09G015530, Chr13G011430 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G709000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG059530, gene_TRIDC7BG052460 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G427500.1.cds1, TraesCS7B02G327600.1.cds1 ... |
| Poaceae | Zea mays | 10 | Zm00001eb049690_P001, Zm00001eb076370_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18932 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g16390 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2570, evm.TU.LG17.1612 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g00200 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_11_RagTag.1216, evm.TU.Scaffold_4_RagTag.283 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-29071 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-18650, nbisL1-mrna-6893 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-12781 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000008l.62, add.evm.TU.utg000010l.97 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00001201, Maker00008719 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-17003, nbisL1-mrna-17690 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-8853 |
| Salicaceae | Populus euphratica | 2 | populus_peu28990, populus_peu30397 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132603610, gene-LOC132633128 |
| Solanaceae | Solanum chilense | 2 | SOLCI005027300, SOLCI006427800 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107007208, gene-LOC107012961 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.1057_chr01_-, STRG.1322_chr01_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1766 |
| Zosteraceae | Zostera marina | 1 | Zosma01g12090.v3.1 |