Basic Information
Locus ID:
Sgl73634
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 35697028 | 35702927 | + | Sgl73634 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.15 | 85,836.98 Da | 43.89 | 73.20 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 165 | 2.2377E-53 | - |
| Pfam | PF00582 | Universal stress protein family | 18 | 155 | 1.4E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 449 | 698 | 7.3E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 704 | 3.55E-68 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 155 | 2.93E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 423 | 516 | 6.6E-23 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 163 | 1.8E-10 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 517 | 721 | 2.5E-48 | - |
| SMART | SM00220 | serkin_6 | 444 | 714 | 4.2E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 444 | 722 | 35.142082 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 562 | 574 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 763 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 240 | - | - |
| Coils | Coil | Coil | 339 | 359 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021761816.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M9X5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology