Basic Information
Locus ID:
Sgl73073
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 31829027 | 31831994 | + | Sgl73073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 38,044.52 Da | 42.59 | 69.30 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 35 | 223 | 6.3E-65 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 24 | 151 | 2.7E-33 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 152 | 221 | 1.2E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 254 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 342 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_021716112.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like [Chenopodium quinoa] | 0 |
| Q55BK0 | Ubiquitin fusion degradation protein 1 homolog OS=Dictyostelium discoideum OX=44689 GN=ufd1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology