Basic Information
Locus ID:
Sgl73055
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ubiquitin fusion degradation protein 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 31693383 | 31696453 | + | Sgl73055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 35,279.52 Da | 45.13 | 65.74 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 11 | 182 | 9.3E-79 | IPR004854 |
| Gene3D | G3DSA:2.40.40.50 | - | 2 | 106 | 6.9E-44 | IPR042299 |
| Gene3D | G3DSA:3.10.330.10 | - | 107 | 180 | 1.0E-34 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 237 | 295 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 319 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G29070.2 | Ubiquitin fusion degradation UFD1 family protein. | 0 |
| RefSeq | XP_021716112.1 | ubiquitin recognition factor in ER-associated degradation protein 1-like [Chenopodium quinoa] | 0 |
| P70362 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Mus musculus OX=10090 GN=Ufd1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LCF7 | Ubiquitin fusion degradation protein 1 homolog OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology