Basic Information
Locus ID:
Sgl72711
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 29529718 | 29538778 | - | Sgl72711 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 102,888.60 Da | 41.30 | 83.18 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 739 | 914 | 3.11572E-64 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 278 | 913 | 5.1E-82 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 276 | 916 | 5.1E-109 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 616 | 919 | 6.4E-57 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 262 | 497 | 2.8E-66 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 278 | 916 | 57.112389 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 279 | 294 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 859 | 876 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 251 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_021861826.1 | ubiquitin carboxyl-terminal hydrolase 8 [Spinacia oleracea] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9QF22 | Ubiquitin carboxyl-terminal hydrolase OS=Spinacia oleracea OX=3562 GN=SOVF_186300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology