Basic Information
Locus ID:
Sgl71316
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA8 | 3593139 | 3607681 | - | Sgl71316 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 127,959.71 Da | 48.02 | 76.58 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 812 | 852 | 4.16738E-19 | - |
| Pfam | PF16135 | Tify domain binding domain | 746 | 795 | 5.4E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 405 | 460 | 1.2E-11 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 813 | 854 | 3.3E-8 | IPR019787 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 797 | 853 | 2.47E-14 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 1051 | 1140 | 2.59E-5 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 890 | 954 | 5.35E-10 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 895 | 959 | 1.1E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 799 | 888 | 7.4E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 900 | 956 | 4.1E-4 | IPR001965 |
| SMART | SM00249 | PHD_3 | 812 | 853 | 5.1E-11 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 810 | 855 | 10.273199 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 813 | 852 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 665 | 687 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 711 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 639 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q14839 | Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens OX=9606 GN=CHD4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QNE0 | PHD-type domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_164770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology