Basic Information
Locus ID:
Sgl68968
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CDPK9
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 23599963 | 23628110 | - | Sgl68968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 70,157.07 Da | 39.73 | 97.58 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 441 | 486 | 7.52974E-12 | IPR002048 |
| CDD | cd00051 | EFh | 499 | 545 | 1.0601E-11 | IPR002048 |
| Pfam | PF01148 | Cytidylyltransferase family | 57 | 138 | 1.4E-19 | - |
| Pfam | PF13405 | EF-hand domain | 499 | 526 | 1.2E-7 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 442 | 487 | 1.7E-7 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 343 | 393 | 2.1E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 424 | 6.48E-13 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 441 | 544 | 5.94E-28 | IPR011992 |
| SUPERFAMILY | SSF53720 | ALDH-like | 147 | 227 | 2.23E-7 | IPR016161 |
| Gene3D | G3DSA:3.40.605.10 | Aldehyde Dehydrogenase; Chain A, domain 1 | 146 | 307 | 7.3E-8 | IPR016162 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 339 | 393 | 3.2E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 405 | 556 | 1.1E-31 | - |
| SMART | SM00054 | efh_1 | 498 | 526 | 0.015 | IPR002048 |
| SMART | SM00054 | efh_1 | 462 | 490 | 0.0061 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 494 | 529 | 15.210791 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 458 | 493 | 11.612284 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 471 | 483 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 507 | 519 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38910.1 | calcium-dependent protein kinase 20. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_010062000.1 | calcium-dependent protein kinase 11 [Eucalyptus grandis] | 0 |
| Q7XIM0 | Calcium-dependent protein kinase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A059BSH6 | Calcium-dependent protein kinase 11-like OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F02611 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||