Basic Information
Locus ID:
Sgl68917
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Inactive leucine-rich repeat receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 22984419 | 22991808 | - | Sgl68917 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 71,835.32 Da | 49.69 | 91.13 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 109 | 168 | 2.3E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 353 | 616 | 1.5E-39 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 21 | 55 | 3.8E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 623 | 5.19E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 219 | 4.91E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 226 | 1.4E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 176 | 2.9E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 325 | 425 | 6.9E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 426 | 643 | 4.0E-45 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 350 | 627 | 35.820515 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 624 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 588 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10850.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021717384.1 | inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Chenopodium quinoa] | 0 |
| Q84MA9 | Inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 OS=Arabidopsis thaliana OX=3702 GN=At1g60630 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803N1L8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg5070, jg7417, jg9723 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25874 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah037308 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g206650 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg11827, Sbi_jg46585 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21062 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00021040 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl68917 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000015662, gene:ENSEOMG00000039143 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0007430, CQ.Regalona.r1.9BG0014590 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30219790 |
| Apiaceae | Apium graveolens | 3 | Ag3G00483, Ag5G01885, Ag8G01936 |
| Arecaceae | Cocos nucifera | 2 | COCNU_08G009420, COCNU_09G006110 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103723877, gene-LOC120104244 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1015.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G15674, Ftri3G22077 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G10850.1, AT1G60630.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10007013m.g.v1.0, Thhalv10023334m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g09550.v2.2, Sp2g04090.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g059740.2N, BniB04g028780.2N, BniB07g046550.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1617 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1740 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno14g07920 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g16650 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5561 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG03.969 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00025303 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb6G31304, Lb7G34112 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.4043, BH07.3857, CH07.3922 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0151610, gene-QOZ80_2BG0206980 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0633560.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_056870 |
| Poaceae | Oryza coarctata | 2 | Oco03G026210, Oco04G026630 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g58390.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G329600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0600008, Pt_Chr0600021 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G026930, Chr13G000220 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G776200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG061200, gene_TRIDC6BG071310 |
| Poaceae | Triticum aestivum | 3 | TraesCS6A02G417300.1, TraesCS6B02G472100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb259460_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-39736 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g17480 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2217, evm.TU.LG23.449 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g14350 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_17_RagTag.694 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-23380 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14188 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-20013 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000013l.372 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00004479 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-10766 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-14353 |
| Salicaceae | Populus euphratica | 2 | populus_peu07306, populus_peu21299 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132614727 |
| Solanaceae | Solanum chilense | 1 | SOLCI006296400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107017961 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.683_chr01_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0014 |
| Zosteraceae | Zostera marina | 1 | Zosma05g30870.v3.1 |