Basic Information
Locus ID:
Sgl68318
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 13281207 | 13282571 | - | Sgl68318 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.74 | 50,555.63 Da | 47.48 | 86.76 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 274 | 316 | 2.4E-9 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 28 | 191 | 3.8E-33 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 272 | 332 | 4.45E-15 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 262 | 326 | 3.6E-14 | IPR036638 |
| SMART | SM00353 | finulus | 273 | 322 | 1.3E-14 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 267 | 316 | 15.821287 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 266 | - | - |
| Coils | Coil | Coil | 313 | 333 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_021767200.1 | transcription factor MYC2-like [Chenopodium quinoa] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M360 | BHLH domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology