Basic Information
Locus ID:
Sgl68151
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 11277197 | 11287102 | + | Sgl68151 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 66,786.77 Da | 36.32 | 90.02 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 33 | 77 | 8.62217E-5 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 312 | 577 | 4.7E-47 | IPR001245 |
| Pfam | PF01476 | LysM domain | 34 | 78 | 1.5E-4 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 291 | 580 | 9.71E-77 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 5.36E-6 | IPR036779 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 589 | 2.1E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 381 | 1.1E-27 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 25 | 83 | 1.2E-9 | IPR036779 |
| SMART | SM00220 | serkin_6 | 311 | 584 | 6.5E-43 | IPR000719 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 5.2E-4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 94 | 140 | 0.83 | IPR018392 |
| SMART | SM00257 | LysM_2 | 159 | 201 | 9.3 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 584 | 39.014801 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.926193 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 317 | 339 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021856598.1 | chitin elicitor receptor kinase 1-like isoform X1 [Spinacia oleracea] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology