halophFGD

Basic Information

Locus ID: Sgl68120

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: RWP-RK domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB7	11039673	11043369	-	Sgl68120

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.71	44,025.33 Da	43.82	74.87	-0.77

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02042	RWP-RK domain	296	344	1.5E-17	IPR003035
ProSiteProfiles	PS51519	RWP-RK domain profile.	284	367	14.083406	IPR003035
Coils	Coil	Coil	353	380	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G35590.2	-
RefSeq	XP_021744167.1	uncharacterized protein LOC110710203 [Chenopodium quinoa]
Swiss-Prot	O81791	Protein RKD5 OS=Arabidopsis thaliana OX=3702 GN=RKD5 PE=3 SV=1
TrEMBL	A0A5N5MG36	RWP-RK domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_010397 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg10266, jg13128, jg1682, jg1683, jg23974, jg25754, jg33924
Aizoaceae	Mesembryanthemum crystallinum	3	gene_13130, gene_13367, gene_3350
Amaranthaceae	Atriplex hortensis	2	Ah018598, Ah034475
Amaranthaceae	Beta vulgaris	3	BVRB_2g034080, BVRB_2g034090, BVRB_5g114720
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg15061, Sbi_jg20307, Sbi_jg20309, Sbi_jg31122 ... Sbi_jg55874
Amaranthaceae	Salicornia europaea	3	Seu_jg17212, Seu_jg25767, Seu_jg26373
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00004634, GOSA_00009050, GOSA_00020091
Amaranthaceae	Suaeda glauca	5	Sgl01308, Sgl06388, Sgl43130, Sgl63625, Sgl68120
Amaranthaceae	Chenopodium album	4	gene:ENSEOMG00000001927, gene:ENSEOMG00000007117 ... gene:ENSEOMG00000024788, gene:ENSEOMG00000046761
Amaranthaceae	Chenopodium quinoa	6	CQ.Regalona.r1.2AG0013700, CQ.Regalona.r1.2BG0015820 ... CQ.Regalona.r1.3AG0005270, CQ.Regalona.r1.3BG0005370, CQ.Regalona.r1.5AG0020630, CQ.Regalona.r1.5BG0022020
Anacardiaceae	Pistacia vera	2	pistato.v30144110, pistato.v30261080
Apiaceae	Apium graveolens	7	Ag10G00091, Ag10G02510, Ag4G00361, Ag5G00612, Ag7G00405 ... Ag7G00406, Ag9G00715
Arecaceae	Cocos nucifera	5	COCNU_02G012730, COCNU_06G002560, COCNU_10G008890 ... scaffold004312G000060, scaffold014789G000020
Arecaceae	Phoenix dactylifera	9	gene-LOC103708559, gene-LOC103719042, gene-LOC103723984 ... gene-LOC108511736, gene-LOC113462385, gene-LOC113463337, gene-LOC120105511, gene-LOC120110775, gene-LOC120112229
Asparagaceae	Asparagus officinalis	4	AsparagusV1_03.1219.V1.1, AsparagusV1_03.30.V1.1 ... AsparagusV1_05.2067.V1.1, AsparagusV1_06.464.V1.1
Asteraceae	Flaveria trinervia	4	Ftri16G07380, Ftri18G27670, Ftri18G29740, Ftri6G08849
Brassicaceae	Arabidopsis thaliana	6	AT1G18790.1, AT1G74480.1, AT4G35590.1, AT5G16100.1 ... AT5G53040.1, AT5G66990.1
Brassicaceae	Eutrema salsugineum	7	Thhalv10005560m.g.v1.0, Thhalv10009656m.g.v1.0 ... Thhalv10009845m.g.v1.0, Thhalv10013525m.g.v1.0, Thhalv10015321m.g.v1.0, Thhalv10019554m.g.v1.0, Thhalv10027037m.g.v1.0
Brassicaceae	Schrenkiella parvula	6	Sp1g16770.v2.2, Sp2g29670.v2.2, Sp5g29660.v2.2 ... Sp6g15190.v2.2, Sp6g28040.v2.2, Sp7g33360.v2.2
Brassicaceae	Brassica nigra	11	BniB02g031140.2N, BniB02g046630.2N, BniB02g046650.2N ... BniB03g007830.2N, BniB03g007850.2N, BniB03g052990.2N, BniB05g002840.2N, BniB05g022840.2N, BniB05g071290.2N, BniB06g014990.2N, BniB07g043850.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq04G1767, Ceq09G1615
Casuarinaceae	Casuarina glauca	2	Cgl04G1944, Cgl06G0057
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno01g11290, gene.Cymno03g10810, gene.Cymno06g03950 ... gene.Cymno11g05650, gene.Cymno11g05660
Dunaliellaceae	Dunaliella salina	6	Dusal.0149s00011.v1.0, Dusal.0273s00002.v1.0 ... Dusal.0487s00007.v1.0, Dusal.0785s00002.v1.0, Dusal.0892s00002.v1.0, Dusal.0948s00001.v1.0
Hydrocharitaceae	Thalassia testudinum	4	gene.Thate02g23780, gene.Thate03g15070, gene.Thate04g05750 ... gene.Thate07g06290
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-10422, nbisL1-mrna-11557
Nitrariaceae	Nitraria sibirica	3	evm.TU.Contig5.8, evm.TU.LG06.1218, evm.TU.LG10.953
Plantaginaceae	Plantago ovata	7	Pov_00010951, Pov_00013415, Pov_00018923, Pov_00031170 ... Pov_00031171, Pov_00031179, Pov_00031246
Plumbaginaceae	Limonium bicolor	8	Lb0G38308, Lb1G04154, Lb1G04156, Lb1G04157, Lb1G07818 ... Lb2G09383, Lb3G21320, Lb6G29753
Poaceae	Echinochloa crus-galli	17	AH02.2005, AH05.495, AH06.907, AH07.3459, AH09.1932 ... AH09.1933, BH02.2052, BH06.940, BH07.3288, BH09.2098, BH09.2099, CH02.2225, CH05.616, CH06.1034, CH07.3341, CH09.2242, CH09.2243
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_1AG0020620, gene-QOZ80_1BG0070490 ... gene-QOZ80_2BG0200960, gene-QOZ80_2BG0201060, gene-QOZ80_4AG0307280, gene-QOZ80_4BG0338320, gene-QOZ80_5AG0386170, gene-QOZ80_5BG0433290, gene-QOZ80_5BG0433300
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.2HG0187910.1, HORVU.MOREX.r3.2HG0187920.1 ... HORVU.MOREX.r3.6HG0615300.1, HORVU.MOREX.r3.7HG0656970.1, HORVU.MOREX.r3.7HG0666570.1, HORVU.MOREX.r3.7HG0740630.1
Poaceae	Lolium multiflorum	5	gene-QYE76_016950, gene-QYE76_024872, gene-QYE76_028900 ... gene-QYE76_045576, gene-QYE76_053290
Poaceae	Oryza coarctata	8	Oco01G012460, Oco02G012590, Oco03G021490, Oco04G022120 ... Oco07G013190, Oco08G012760, Oco12G005920, Oco24G003490
Poaceae	Oryza sativa	5	LOC_Os01g37100.1, LOC_Os02g51090.1, LOC_Os04g26080.1 ... LOC_Os04g47640.1, LOC_Os12g12970.1
Poaceae	Paspalum vaginatum	5	gene-BS78_03G163000, gene-BS78_04G277300, gene-BS78_K017500 ... gene-BS78_06G191800, gene-BS78_10G095900
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0106254, Pt_Chr0106259, Pt_Chr0203333, Pt_Chr0203356 ... Pt_Chr0301646
Poaceae	Sporobolus alterniflorus	16	Chr02G017900, Chr04G024110, Chr05G016120, Chr06G002380 ... Chr06G026470, Chr15G003710, Chr19G013810, Chr19G013820, Chr23G006460, Chr25G005390, Chr26G003090, Chr26G013000, Chr27G002000, Chr28G001470, Chr28G002380, Chr30G005240
Poaceae	Thinopyrum elongatum	7	Tel1E01G736000, Tel2E01G684400, Tel2E01G684500 ... Tel6E01G550300, Tel7E01G347400, Tel7E01G849300, Tel7E01G850000
Poaceae	Triticum dicoccoides	4	gene_TRIDC2AG058430, gene_TRIDC2AG058460 ... gene_TRIDC2BG061400, gene_TRIDC2BG061420
Poaceae	Triticum aestivum	15	TraesCS2A02G404400.1, TraesCS2A02G404500.1 ... TraesCS2B02G422300.1, TraesCS2B02G422400.1, TraesCS2D02G401300.1, TraesCS2D02G401400.2, TraesCS6A02G307500.1, TraesCS6A02G307600.1, TraesCS6B02G336100.1, TraesCS6B02G336200.1, TraesCS6D02G286800.1, TraesCS7A02G135900.1, TraesCS7A02G188400.1, TraesCS7A02G497400.1, TraesCS7D02G189500.1
Poaceae	Zea mays	4	Zm00001eb073910_P001, Zm00001eb133740_P001 ... Zm00001eb254520_P001, Zm00001eb372360_P001
Poaceae	Zoysia japonica	10	nbis-gene-1138, nbis-gene-12324, nbis-gene-18956 ... nbis-gene-21433, nbis-gene-22553, nbis-gene-35127, nbis-gene-47368, nbis-gene-51396, nbis-gene-52022, nbis-gene-52023
Poaceae	Zoysia macrostachya	7	Zma_g10469, Zma_g14415, Zma_g18717, Zma_g24907, Zma_g25653 ... Zma_g29393, Zma_g8041
Portulacaceae	Portulaca oleracea	5	evm.TU.LG01.1561, evm.TU.LG01.2252, evm.TU.LG01.2636 ... evm.TU.LG14.1771, evm.TU.LG14.814
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g25320, gene.Posoc03g20880, gene.Posoc04g11590
Rhizophoraceae	Bruguiera sexangula	5	evm.TU.Scaffold_10_RagTag.677, evm.TU.Scaffold_2_RagTag.1635 ... evm.TU.Scaffold_3_RagTag.34, evm.TU.Scaffold_4_RagTag.583, evm.TU.Scaffold_6_RagTag.2190
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-122, nbisL1-mrna-13814, nbisL1-mrna-13815 ... nbisL1-mrna-13816, nbisL1-mrna-166, nbisL1-mrna-16948, nbisL1-mrna-28786, nbisL1-mrna-3574
Rhizophoraceae	Ceriops tagal	8	nbisL1-mrna-12866, nbisL1-mrna-13030, nbisL1-mrna-20316 ... nbisL1-mrna-5912, nbisL1-mrna-5968, nbisL1-mrna-7433, nbisL1-mrna-8903, nbisL1-mrna-915
Rhizophoraceae	Ceriops zippeliana	7	nbisL1-mrna-11647, nbisL1-mrna-12468, nbisL1-mrna-1765 ... nbisL1-mrna-19021, nbisL1-mrna-20707, nbisL1-mrna-8927, nbisL1-mrna-8928
Rhizophoraceae	Kandelia candel	5	add.evm.TU.utg000008l.136, evm.TU.utg000009l.322 ... evm.TU.utg000011l.1342, evm.TU.utg000019l.1195, evm.TU.utg000033l.479
Rhizophoraceae	Kandelia obovata	2	Maker00006781, Maker00007141
Rhizophoraceae	Rhizophora apiculata	6	nbisL1-mrna-15722, nbisL1-mrna-17082, nbisL1-mrna-17818 ... nbisL1-mrna-18287, nbisL1-mrna-22612, nbisL1-mrna-6604
Rhizophoraceae	Rhizophora mangle	5	nbisL1-mrna-1558, nbisL1-mrna-16781, nbisL1-mrna-2486 ... nbisL1-mrna-2928, nbisL1-mrna-8039
Salicaceae	Populus euphratica	5	populus_peu12598, populus_peu14023, populus_peu23227 ... populus_peu28008, populus_peu29456
Solanaceae	Lycium barbarum	7	gene-LOC132623285, gene-LOC132624413, gene-LOC132624787 ... gene-LOC132631204, gene-LOC132631463, gene-LOC132631464, gene-LOC132637450
Solanaceae	Solanum chilense	2	SOLCI001686600, SOLCI002556200
Solanaceae	Solanum pennellii	3	gene-LOC107013463, gene-LOC107028266, gene-LOC114076522
Zosteraceae	Zostera marina	3	Zosma01g00330.v3.1, Zosma03g17980.v3.1, Zosma04g04210.v3.1