Basic Information
Locus ID:
Sgl67835
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 8812666 | 8816289 | + | Sgl67835 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 68,139.50 Da | 43.91 | 104.77 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 262 | 285 | 0.75 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 235 | 258 | 0.012 | IPR001611 |
| Pfam | PF12937 | F-box-like | 70 | 103 | 6.7E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 176 | 637 | 1.1E-36 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 62 | 105 | 6.41E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 440 | 502 | 4.8E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 60 | 107 | 5.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 503 | 595 | 1.6E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 160 | 248 | 1.4E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 249 | 438 | 7.5E-37 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 474 | 499 | 2.1 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 4.4E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 342 | 367 | 0.71 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 236 | 261 | 4.7E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 530 | 555 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 556 | 580 | 0.24 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 262 | 287 | 8.1E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 582 | 607 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 368 | 393 | 0.056 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 503 | 528 | 28.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 184 | 209 | 2.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 448 | 473 | 31.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 210 | 235 | 1.6E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 394 | 419 | 26.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021769345.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RGU6 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_074260 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology