Basic Information
Locus ID:
Sgl67211
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 4736404 | 4739954 | + | Sgl67211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 100,693.43 Da | 36.84 | 86.97 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 481 | 507 | 0.0064904 | - |
| CDD | cd14066 | STKc_IRAK | 566 | 844 | 7.07758E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 565 | 840 | 6.5E-47 | IPR001245 |
| Pfam | PF12819 | Malectin-like domain | 85 | 445 | 7.4E-31 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 533 | 846 | 1.01E-75 | IPR011009 |
| Gene3D | G3DSA:2.60.120.430 | - | 33 | 208 | 3.4E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 644 | 872 | 3.9E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 252 | 446 | 9.5E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 525 | 643 | 8.8E-32 | - |
| SMART | SM00220 | serkin_6 | 560 | 846 | 2.8E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 560 | 846 | 35.990124 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 693 | 705 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 566 | 596 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_021739425.1 | receptor-like protein kinase FERONIA [Chenopodium quinoa] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LCB4 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035594 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl62650, Sgl67211, Sgl67272 |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.2BG0019900, CQ.Regalona.r1.2BG0019920 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.512 |