Basic Information
Locus ID:
Sgl67114
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
FIZZY-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB7 | 4081519 | 4084513 | + | Sgl67114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.54 | 56,368.47 Da | 42.23 | 70.51 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 213 | 489 | 9.35775E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 454 | 489 | 1.9E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 364 | 404 | 2.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 324 | 359 | 3.2E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 191 | 489 | 4.27E-63 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 149 | 491 | 2.2E-124 | IPR015943 |
| SMART | SM00320 | WD40_4 | 407 | 447 | 150.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 450 | 489 | 1.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 362 | 404 | 5.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 279 | 316 | 0.21 | IPR001680 |
| SMART | SM00320 | WD40_4 | 236 | 276 | 0.045 | IPR001680 |
| SMART | SM00320 | WD40_4 | 320 | 359 | 1.5E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 192 | 233 | 46.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 327 | 368 | 13.449252 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 369 | 413 | 8.971213 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 457 | 490 | 11.681953 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 244 | 285 | 9.004632 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 457 | 490 | 14.117617 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 327 | 359 | 10.864685 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 476 | 490 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 391 | 405 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 182 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G13840.1 | FIZZY-related 3. | 0 |
| RefSeq | XP_010690812.2 | protein FIZZY-RELATED 3 [Beta vulgaris subsp. vulgaris] | 0 |
| A0A396ISC0 | B-type cell cycle switch protein ccs52B OS=Medicago truncatula OX=3880 GN=CCS52B PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S028 | WD_REPEATS_REGION domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_009880 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology