HalophFGD

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Basic Information
Locus ID: Sgl66969
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chrB7 3162690 3164369 - Sgl66969
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.39 64,489.72 Da 39.87 106.92 0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 19 49 3.1E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 16 101 3.01E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 5 50 5.9E-7 -
SMART SM00256 fbox_2 18 58 2.1E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021719209.1 uncharacterized protein LOC110686903 [Chenopodium quinoa] 0
TrEMBL A0A803NDV6 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 4 Ah025728, Ah025731, Ah025734, Ah025748
Amaranthaceae Salicornia bigelovii 5 Sbi_jg59328, Sbi_jg59330, Sbi_jg59331, Sbi_jg59332 ...
Sbi_jg63295
Amaranthaceae Salicornia europaea 5 Seu_jg13336, Seu_jg23585, Seu_jg23587, Seu_jg23591 ...
Seu_jg23593
Amaranthaceae Suaeda glauca 1 Sgl66969
Amaranthaceae Chenopodium quinoa 3 CQ.Regalona.r1.5BG0019180, CQ.Regalona.r1.6AG0014140 ...
CQ.Regalona.r1.6AG0014150
Arecaceae Phoenix dactylifera 1 gene-LOC103709460
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.