Basic Information
Locus ID:
Sgl66473
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA7 | 52784125 | 52787399 | + | Sgl66473 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 70,985.71 Da | 44.82 | 87.56 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 24 | 114 | 7.3E-8 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 218 | 489 | 1.2E-89 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 115 | 2.12E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 10 | 165 | 1.3E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 128 | 3.6E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 10.985188 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 218 | 513 | 89.702393 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 591 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 603 | 617 | - | - |
| Coils | Coil | Coil | 549 | 576 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology