HalophFGD

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Basic Information
Locus ID: Sgl64798
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: DNA RNA polymerases superfamily protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrA7 30524326 30524949 - Sgl64798
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.40 24,053.24 Da 58.52 82.03 -0.68
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03732 Retrotransposon gag protein 124 204 8.5E-11 IPR005162
MobiDBLite mobidb-lite consensus disorder prediction 1 25 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021741331.1 uncharacterized protein LOC110707612 [Chenopodium quinoa] 0
TrEMBL A0A392NZC9 Gag-pol poly protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 18 Sgl09029, Sgl14284, Sgl14688, Sgl19445, Sgl21717, Sgl32301 ...
Sgl32670, Sgl33104, Sgl37596, Sgl37960, Sgl38352, Sgl44440, Sgl44807, Sgl49205, Sgl49568, Sgl49582, Sgl64798, Sgl69259
Brassicaceae Schrenkiella parvula 1 Sp5g02200.v2.2
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.